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  5. MA_10186845g0010

MA_10186845g0010


Description : CSC1-like protein At3g21620 OS=Arabidopsis thaliana (sp|q9lve4|cscl4_arath : 137.0)


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10186845g0010
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT3G54510 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 OrthoFinder output from all 47 species
Aspi01Gene00231.t1 ERD4, Aspi01Gene00231 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63971.t1 ERD4, Aspi01Gene63971 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0104.g044705 No alias calcium-permeable channel *(OSCA) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0245.g059933 No alias calcium-permeable channel *(OSCA) & original... 0.01 OrthoFinder output from all 47 species
Cba_g27537 No alias calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g21426 No alias calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07879 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40944 No alias calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28230 ERD4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011097001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
Gb_08556 ERD4 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39320.1 HYP1, ATHYP1,... calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
MA_18050g0010 ERD4 CSC1-like protein ERD4 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_78696g0010 ERD4 calcium-permeable channel (OSCA) 0.04 OrthoFinder output from all 47 species
Mp7g04480.1 No alias calcium-permeable channel (OSCA) 0.01 OrthoFinder output from all 47 species
Mp8g07950.1 ERD4 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Msp_g14451 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04933 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27838 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17063 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03204 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13639 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Smo41460 ERD4 Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
Solyc08g076310.3.1 Solyc08g076310 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Spa_g06692 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005168_P001 RXW8, Zm00001e005168 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR032880 Csc1/OSCA1-like_N 7 109
No external refs found!