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  5. MA_101752g0020

MA_101752g0020 (ATTCP24, TCP24)


Aliases : ATTCP24, TCP24

Description : transcription factor (TCP)


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_101752g0020
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00072430 TCP13, TFPD,... RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
AT1G53230 TCP3 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 0.02 OrthoFinder output from all 47 species
AT1G68800 TCP12, BRC2 TCP domain protein 12 0.04 OrthoFinder output from all 47 species
AT3G02150 TCP13, TFPD, PTF1 plastid transcription factor 1 0.03 OrthoFinder output from all 47 species
Aev_g07745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18510 ATTCP24, TCP24 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18903 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28173 TCP2 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16756 TCP10 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40074 TCP10 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07553 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48962.t1 TCP13, TFPD,... TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11506 ATTCP24, TCP24 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Gb_18221 TCP4, MEE35 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Gb_35810 TCP2 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Gb_38376 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Gb_38377 TCP2 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os01g11550.1 TCP4, MEE35,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
LOC_Os01g55750.1 TCP5, LOC_Os01g55750 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os03g57190.1 ATTCP24, TCP24,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Len_g03300 TCP2 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g19590.1 TCP3 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Msp_g48155 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05160 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33965 TCP10 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41668 TCP4, MEE35 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23969 TCP4, MEE35 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20245 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26727 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g077250.2.1 TCP4, MEE35,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc02g089020.2.1 TCP13, TFPD,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc02g089830.2.1 TCP1, Solyc02g089830 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc03g115010.3.1 TCP5, Solyc03g115010 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc04g006980.1.1 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc05g009900.3.1 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc06g069460.3.1 TCP5, Solyc06g069460 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Tin_g03446 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011911_P001 ATTCP24, TCP24,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e019734_P001 TCP5, Zm00001e019734 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e032821_P001 TCP2, Zm00001e032821 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 275 462
No external refs found!