MA_10168585g0010

Description : platform ATPase (CDC48)

Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10168585g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00072p00117380	evm_27.TU.AmTr_v1...	Cell division control protein 48 homolog D...	0.03	OrthoFinder output from all 47 species
Azfi_s0178.g056166	No alias	platform ATPase CDC48 & original description: CDS=301-2751	0.03	OrthoFinder output from all 47 species
Cba_g22418	No alias	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g67891	CDC48A, CDC48, ATCDC48	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g09970	No alias	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01025723001	No alias	Cell division control protein 48 homolog D...	0.04	OrthoFinder output from all 47 species
LOC_Os03g05730.1	LOC_Os03g05730	platform ATPase (CDC48)	0.04	OrthoFinder output from all 47 species
LOC_Os10g30580.1	LOC_Os10g30580	platform ATPase (CDC48)	0.04	OrthoFinder output from all 47 species
Lfl_g28208	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g06020	No alias	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016746	acyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	529	570
IPR041569	AAA_lid_3	253	294
IPR003959	ATPase_AAA_core	101	230
IPR003959	ATPase_AAA_core	374	507
IPR004201	Cdc48_dom2	5	51

External Links

No external refs found!