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  5. MA_10123705g0010

MA_10123705g0010


Description : plant-specific E3 ubiquitin ligase (RSL/RFA)


Gene families : OG0000695 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000695_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10123705g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g018903 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.02 OrthoFinder output from all 47 species
Aev_g40090 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.03 OrthoFinder output from all 47 species
Als_g01596 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g13555 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.02 OrthoFinder output from all 47 species
Gb_29625 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.05 OrthoFinder output from all 47 species
LOC_Os09g11170.1 LOC_Os09g11170 plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 OrthoFinder output from all 47 species
Pnu_g06303 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.04 OrthoFinder output from all 47 species
Solyc03g115920.3.1 Solyc03g115920 plant-specific E3 ubiquitin ligase (RSL/RFA) 0.04 OrthoFinder output from all 47 species
Zm00001e022192_P001 Zm00001e022192 plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004668 protein-arginine deiminase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009445 putrescine metabolic process IEP HCCA
BP GO:0009446 putrescine biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002867 IBR_dom 235 298
IPR002867 IBR_dom 319 363
No external refs found!