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  5. MA_10123473g0010

MA_10123473g0010 (RPS17, CS17, PRPS17)


Aliases : RPS17, CS17, PRPS17

Description : component psRPS17 of small ribosomal subunit proteome


Gene families : OG0002325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10123473g0010
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00201470 RPS17, CS17,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT1G79850 RPS17, CS17, PRPS17 ribosomal protein S17 0.12 OrthoFinder output from all 47 species
Adi_g012725 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ala_g13255 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ceric.11G069100.1 Ceric.11G069100 component *(uS17c) of small plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Cre02.g118950 emb1129 Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Dde_g25473 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Gb_07769 RPS17, CS17, PRPS17 component psRPS17 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Mp5g05080.1 RPS17, CS17, PRPS17 component psRPS17 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Nbi_g24135 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ore_g06145 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pp3c11_14630V3.1 RPS17, CS17,... ribosomal protein S17 0.03 OrthoFinder output from all 47 species
Pp3c1_12860V3.1 RPS17, CS17,... ribosomal protein S17 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019876 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc03g120630.4.1 RPS17, CS17,... component psRPS17 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Spa_g48114 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Tin_g09281 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Zm00001e028738_P001 RPS17, CS17,... component psRPS17 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 63 126
No external refs found!