MA_10111030g0010

Description : AAA-ATPase At3g28580 OS=Arabidopsis thaliana (sp|q9ljj7|aatp9_arath : 257.0)

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10111030g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00267180	BCS1,...	AAA-ATPase At3g28540 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT3G28540	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	OrthoFinder output from all 47 species
Adi_g054957	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g077317	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g52993	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g03243	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g29709	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g05632	No alias	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Dcu_g08154	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g08189	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g16997	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
MA_10430798g0020	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_165229g0020	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Nbi_g11172	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g42642	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g04477	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09594	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g27975	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo419965	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Spa_g49606	No alias	not classified & original description: none	0.11	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	17	107
IPR003959	ATPase_AAA_core	232	276

External Links

No external refs found!

MA_10111030g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation