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  5. Pp3s62_110V3.1

Pp3s62_110V3.1 (Pp3s62_110)


Aliases : Pp3s62_110

Description : RNA helicase family protein


Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3s62_110V3.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00234010 evm_27.TU.AmTr_v1... Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.02 OrthoFinder output from all 47 species
Als_g01190 EMB3011 RNA helicase *(Prp16) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g11071 No alias RNA helicase Prp43 of Intron-Lariat Spliceosome complex... 0.01 OrthoFinder output from all 47 species
Aob_g11608 ESP3, EMB2733 RNA helicase *(Prp2) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35146 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os08g24760.1 ESP3, EMB2733,... RNA helicase (Prp2) 0.01 OrthoFinder output from all 47 species
MA_34468g0010 No alias helicase Prp43 of Intron-Lariat Spliceosome complex 0.01 OrthoFinder output from all 47 species
Msp_g32552 EMB3011 RNA helicase *(Prp16) & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009152 No alias not classified & original description: CDS=1-849 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009161 No alias not classified & original description: CDS=1-1362 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009162 No alias not classified & original description: CDS=1-849 0.02 OrthoFinder output from all 47 species
Sam_g29503 No alias RNA helicase *(Prp22) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011709 DEAD-box_helicase_OB_fold 73 149
No external refs found!