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  5. Pp3s1173_10V3.1

Pp3s1173_10V3.1 (VCR, Pp3s1173_10)


Aliases : VCR, Pp3s1173_10

Description : varicose-related


Gene families : OG0001030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3s1173_10V3.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Adi_g069030 VCR not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g071660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10707 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os06g19660.1 VCS, LOC_Os06g19660 scaffold component VCS of mRNA decapping complex 0.01 OrthoFinder output from all 47 species
Nbi_g03858 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.01 OrthoFinder output from all 47 species
Spa_g23840 VCS not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!