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  5. Pp3c9_25680V3.1

Pp3c9_25680V3.1 (Pp3c9_25680)


Aliases : Pp3c9_25680

Description : No annotation


Gene families : OG0008099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c9_25680V3.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_14050V3.1 Pp3c10_14050 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c10_17990V3.1 Pp3c10_17990 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c10_6200V3.1 Pp3c10_6200 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c12_1670V3.1 Pp3c12_1670 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c16_16730V3.1 Pp3c16_16730 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c19_13460V3.1 Pp3c19_13460 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c1_29690V3.1 Pp3c1_29690 methyl-CPG-binding domain 9 0.03 OrthoFinder output from all 47 species
Pp3c1_32680V3.1 Pp3c1_32680 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c1_7530V3.1 Pp3c1_7530 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c20_20591V3.1 Pp3c20_20591 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c20_9150V3.1 Pp3c20_9150 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c21_2620V3.1 Pp3c21_2620 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c21_3200V3.1 Pp3c21_3200 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c22_11910V3.1 Pp3c22_11910 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c22_3600V3.1 Pp3c22_3600 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c24_20860V3.1 Pp3c24_20860 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c2_18690V3.1 Pp3c2_18690 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c3_26830V3.1 Pp3c3_26830 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c7_25170V3.1 Pp3c7_25170 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c8_21380V3.1 Pp3c8_21380 No annotation 0.02 OrthoFinder output from all 47 species
Pp3s466_20V3.1 SDG15, ATXR5, Pp3s466_20 No annotation 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!