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  5. Pp3c9_25180V3.1

Pp3c9_25180V3.1 (Pp3c9_25180)


Aliases : Pp3c9_25180

Description : EF hand calcium-binding protein family


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c9_25180V3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G17180 No alias unknown protein; Has 1807 Blast hits to 1807 proteins in... 0.02 OrthoFinder output from all 47 species
AT5G17480 APC1, PC1 pollen calcium-binding protein 1 0.01 OrthoFinder output from all 47 species
Adi_g081282 CML23 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34437 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g43415 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g13968 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g25952 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene06621.t1 UNE14, Aspi01Gene06621 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07768.t1 Aspi01Gene07768 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16257.t1 Aspi01Gene16257 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30068.t1 Aspi01Gene30068 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40089.t1 Aspi01Gene40089 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene57716.t1 Aspi01Gene57716 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67147.t1 Aspi01Gene67147 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00276 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g19027 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g30390 TCH2, CML24 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008421001 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea 0.01 OrthoFinder output from all 47 species
GSVIVT01031752001 No alias Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_03899 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
LOC_Os01g04330.1 LOC_Os01g04330 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
LOC_Os08g44660.1 APC1, PC1, LOC_Os08g44660 Polcalcin Phl p 7 OS=Phleum pratense... 0.02 OrthoFinder output from all 47 species
LOC_Os11g04560.1 LOC_Os11g04560 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g13533 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g16905 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23956 TCH2, CML24 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g20815 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g08155 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08724 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g063350.1.1 Solyc02g063350 Probable calcium-binding protein CML18 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Spa_g10112 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52537 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 39 95
IPR002048 EF_hand_dom 130 190
No external refs found!