Aliases : EMB1989, RPB2, NRPB2, Pp3c9_17790
Description : DNA-directed RNA polymerase family protein
Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c9_17790V3.1 | |
Cluster | HCCA: Cluster_13 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00020p00247890 | NRPC2,... | DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Ore_g18671 | DRD2, NRPE2,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pp3c16_10710V3.1 | Pp3c16_10710 | DNA-directed RNA polymerase family protein | 0.02 | OrthoFinder output from all 47 species | |
Pp3c17_12270V3.1 | EMB1989, RPB2,... | DNA-directed RNA polymerase family protein | 0.01 | OrthoFinder output from all 47 species | |
Pp3c24_8970V3.1 | Pp3c24_8970 | DNA-directed RNA polymerase family protein | 0.02 | OrthoFinder output from all 47 species | |
Pp3c25_15140V3.1 | EMB1989, RPB2,... | DNA-directed RNA polymerase family protein | 0.03 | OrthoFinder output from all 47 species | |
Pp3c5_18580V3.1 | EMB1989, RPB2,... | nuclear RNA polymerase A2 | 0.03 | OrthoFinder output from all 47 species | |
Pp3c7_1680V3.1 | EMB1989, RPB2,... | DNA-directed RNA polymerase family protein | 0.02 | OrthoFinder output from all 47 species | |
Pp3c9_12710V3.1 | EMB1989, RPB2,... | DNA-directed RNA polymerase family protein | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
No external refs found! |