1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c7_70V3.1

Pp3c7_70V3.1 (Pp3c7_70)


Aliases : Pp3c7_70

Description : transducin family protein / WD-40 repeat family protein


Gene families : OG0005121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005121_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_70V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00144740 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT5G11240 No alias transducin family protein / WD-40 repeat family protein 0.03 OrthoFinder output from all 47 species
Ala_g07852 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47262 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g40498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g024031 No alias not classified & original description: CDS=168-2150 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000123.23 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre12.g538500 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01017246001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01035079001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_29253 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os01g46060.1 LOC_Os01g46060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g18840.1 LOC_Os03g18840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g00060.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo404454 No alias No description available 0.01 OrthoFinder output from all 47 species
Solyc03g116380.4.1 Solyc03g116380 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e001372_P001 Zm00001e001372 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007148 SSU_processome_Utp12 492 594
IPR001680 WD40_repeat 191 227
IPR001680 WD40_repeat 8 29
No external refs found!