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  5. Pp3c7_6800V3.1

Pp3c7_6800V3.1 (Pp3c7_6800)


Aliases : Pp3c7_6800

Description : No annotation


Gene families : OG0000992 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000992_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_6800V3.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene05554.t1 Aspi01Gene05554 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37121.t1 Aspi01Gene37121 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene42994.t1 Aspi01Gene42994 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54891.t1 SYP125,... Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aspi01Gene59462.t1 Aspi01Gene59462 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63366.t1 Aspi01Gene63366 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72592.t1 Aspi01Gene72592 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g07990.1 LOC_Os01g07990 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Ore_g11983 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g09969 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pp3c13_15770V3.1 Pp3c13_15770 PIF1 helicase 0.05 OrthoFinder output from all 47 species
Pp3c14_26730V3.1 Pp3c14_26730 No annotation 0.06 OrthoFinder output from all 47 species
Pp3c15_9490V3.1 Pp3c15_9490 PIF1 helicase 0.05 OrthoFinder output from all 47 species
Pp3c17_17890V3.1 Pp3c17_17890 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c17_18610V3.1 Pp3c17_18610 PIF1 helicase 0.03 OrthoFinder output from all 47 species
Pp3c18_20670V3.1 Pp3c18_20670 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c1_35290V3.1 Pp3c1_35290 No annotation 0.06 OrthoFinder output from all 47 species
Pp3c22_19090V3.1 Pp3c22_19090 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c23_11220V3.1 Pp3c23_11220 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c23_8030V3.1 Pp3c23_8030 PIF1 helicase 0.03 OrthoFinder output from all 47 species
Pp3c3_20060V3.1 Pp3c3_20060 No annotation 0.06 OrthoFinder output from all 47 species
Pp3s62_90V3.1 Pp3s62_90 PIF1 helicase 0.02 OrthoFinder output from all 47 species
Solyc01g057703.1.1 Solyc01g057703 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g16137 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g46053 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR025476 Helitron_helicase-like 147 325
No external refs found!