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  5. Pp3c7_6560V3.1

Pp3c7_6560V3.1 (CCR2, ATGRP7, GRP7,...)


Aliases : CCR2, ATGRP7, GRP7, GR-RBP7, Pp3c7_6560

Description : cold, circadian rhythm, and RNA binding 1


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_6560V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00103290 evm_27.TU.AmTr_v1... Organelle RRM domain-containing protein 2, mitochondrial... 0.01 OrthoFinder output from all 47 species
AMTR_s00114p00125610 evm_27.TU.AmTr_v1... Small RNA-binding protein 11, chloroplastic... 0.01 OrthoFinder output from all 47 species
Adi_g022151 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g043489 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111293 CCR2, ATGRP7,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g117859 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14283 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0328.g065292 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: CDS=40-945 0.01 OrthoFinder output from all 47 species
Cba_g10906 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g02153 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g16014 GR-RBP4, GRP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g48912 GR-RBP4, GRP4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10430060g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_10435321g0010 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
MA_10436734g0010 GR-RBP3 RNA editing factor (ORRM) 0.01 OrthoFinder output from all 47 species
MA_28218g0010 GR-RBP3 RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species
Msp_g18229 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32203 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28931 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16425 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24558 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14736 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g25482 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc07g063900.3.1 Solyc07g063900 RNA editing factor (ORRM) 0.01 OrthoFinder output from all 47 species
Spa_g10567 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g12557 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g22222 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g04956 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 10 78
No external refs found!