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  5. Pp3c7_4550V3.1

Pp3c7_4550V3.1 (Pp3c7_4550)


Aliases : Pp3c7_4550

Description : No annotation


Gene families : OG0008980 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008980_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_4550V3.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Pp3c22_17170V3.1 Pp3c22_17170 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c23_7790V3.1 Pp3c23_7790 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c2_17790V3.1 Pp3c2_17790 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c3_22840V3.1 Pp3c3_22840 No annotation 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006313 transposition, DNA-mediated IEA Interproscan
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002492 Transposase_Tc1-like 72 133
IPR038717 Tc1-like_DDE_dom 144 295
No external refs found!