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  5. Pp3c7_3770V3.1

Pp3c7_3770V3.1 (EIF4A-2, Pp3c7_3770)


Aliases : EIF4A-2, Pp3c7_3770

Description : eukaryotic translation initiation factor 4A1


Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_3770V3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G72730 No alias DEA(D/H)-box RNA helicase family protein 0.01 OrthoFinder output from all 47 species
AT3G13920 TIF4A1, EIF4A1, RH4 eukaryotic translation initiation factor 4A1 0.03 OrthoFinder output from all 47 species
Adi_g022927 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.01 OrthoFinder output from all 47 species
Adi_g078502 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g20425 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g39617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01779 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.01 OrthoFinder output from all 47 species
Aob_g07823 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g13177 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14573 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0064.g035634 EIF4A-III not classified & original description: CDS=274-1275 0.01 OrthoFinder output from all 47 species
Azfi_s0242.g059785 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g51199 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G044600.1 EIF4A-2, Ceric.14G044600 mRNA unwinding factor *(eIF4A)) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.21G079100.1 EIF4A-2, Ceric.21G079100 mRNA unwinding factor *(eIF4A)) & original description:... 0.02 OrthoFinder output from all 47 species
Cre06.g298650 EIF4A-2 Protein biosynthesis.translation initiation.mRNA... 0.03 OrthoFinder output from all 47 species
Dac_g03718 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10266 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g21828 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g09077 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015173001 EIF4A-2 Protein biosynthesis.translation initiation.mRNA... 0.01 OrthoFinder output from all 47 species
GSVIVT01035374001 EIF4A-2 Protein biosynthesis.translation initiation.mRNA... 0.04 OrthoFinder output from all 47 species
Gb_05983 EIF4A-2 mRNA unwinding factor (eIF4A) 0.01 OrthoFinder output from all 47 species
LOC_Os02g05330.1 EIF4A-2, LOC_Os02g05330 mRNA unwinding factor (eIF4A) 0.02 OrthoFinder output from all 47 species
LOC_Os03g36930.1 EIF4A-III, LOC_Os03g36930 helicase component eIF4A3 of RNA quality control Exon... 0.01 OrthoFinder output from all 47 species
Len_g10653 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29402 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.01 OrthoFinder output from all 47 species
MA_10427502g0010 EIF4A-2 mRNA unwinding factor (eIF4A) 0.02 OrthoFinder output from all 47 species
MA_10436040g0020 EIF4A-III helicase component eIF4A3 of RNA quality control Exon... 0.02 OrthoFinder output from all 47 species
Mp2g02760.1 EIF4A-2 mRNA unwinding factor (eIF4A) 0.04 OrthoFinder output from all 47 species
Msp_g08580 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03558 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g10223 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g06554 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g14903 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.01 OrthoFinder output from all 47 species
Pir_g20207 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g02045 No alias mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23496 No alias mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Smo143895 EIF4A-2 Protein biosynthesis.translation initiation.mRNA... 0.01 OrthoFinder output from all 47 species
Solyc08g062800.3.1 EIF4A-2, Solyc08g062800 mRNA unwinding factor (eIF4A) 0.03 OrthoFinder output from all 47 species
Solyc11g033280.2.1 EIF4A-III, Solyc11g033280 helicase component eIF4A3 of RNA quality control Exon... 0.02 OrthoFinder output from all 47 species
Tin_g03932 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g12485 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.01 OrthoFinder output from all 47 species
Zm00001e030233_P004 EIF4A-2, Zm00001e030233 mRNA unwinding factor (eIF4A) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 266 374
IPR011545 DEAD/DEAH_box_helicase_dom 65 226
No external refs found!