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  5. Pp3c7_3100V3.1

Pp3c7_3100V3.1 (Pp3c7_3100)


Aliases : Pp3c7_3100

Description : GATA type zinc finger transcription factor family protein


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_3100V3.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Adi_g010990 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20871 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21872 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0327.g065256 WLIM1 LIM-type transcription factor & original description: CDS=201-761 0.01 OrthoFinder output from all 47 species
Ehy_g03375 WLIM1 LIM-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g31860 No alias LIM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 10 64
IPR001781 Znf_LIM 109 164
No external refs found!