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  5. Pp3c7_24510V3.1

Pp3c7_24510V3.1 (PAL3, ATPAL3, Pp3c7_24510)


Aliases : PAL3, ATPAL3, Pp3c7_24510

Description : phenylalanine ammonia-lyase 4


Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_24510V3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G04230 PAL3, ATPAL3 phenyl alanine ammonia-lyase 3 0.01 OrthoFinder output from all 47 species
Adi_g004704 ATPAL1, PAL1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g01488 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37417 ATPAL2, PAL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05547.t1 PAL4, Aspi01Gene05547 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05548.t1 PAL4, Aspi01Gene05548 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05555.t1 PAL4, Aspi01Gene05555 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05556.t1 PAL4, Aspi01Gene05556 EC_4.3 carbon-nitrogen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene07446.t1 PAL4, Aspi01Gene07446 EC_4.3 carbon-nitrogen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene25481.t1 PAL4, Aspi01Gene25481 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene48395.t1 ATPAL1, PAL1,... EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035303 PAL4 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2370 0.01 OrthoFinder output from all 47 species
Azfi_s0163.g054246 PAL4 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2322 0.01 OrthoFinder output from all 47 species
Azfi_s0205.g057722 PAL4 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2322 0.01 OrthoFinder output from all 47 species
Dcu_g01768 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g24302 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g33771 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Gb_10978 ATPAL2, PAL2 phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species
Msp_g15632 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g09053 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c11_3080V3.1 Pp3c11_3080 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c22_17310V3.1 Pp3c22_17310 phenyl alanine ammonia-lyase 3 0.03 OrthoFinder output from all 47 species
Pp3c3_1810V3.1 Pp3c3_1810 No annotation 0.02 OrthoFinder output from all 47 species
Smo424403 ATPAL2, PAL2 Phenylalanine ammonia-lyase OS=Citrus limon 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!