Pp3c6_9210V3.1 (ATU2AF65A, Pp3c6_9210)


Aliases : ATU2AF65A, Pp3c6_9210

Description : U2 snRNP auxilliary factor, large subunit, splicing factor


Gene families : OG0000716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000716_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_9210V3.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g19958 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.01 OrthoFinder output from all 47 species
Aob_g13589 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.01 OrthoFinder output from all 47 species
Azfi_s0027.g023719 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.01 OrthoFinder output from all 47 species
Cba_g21572 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.01 OrthoFinder output from all 47 species
Dcu_g13843 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.01 OrthoFinder output from all 47 species
Lfl_g19287 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.01 OrthoFinder output from all 47 species
Mp6g18430.1 No alias large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.01 OrthoFinder output from all 47 species
Msp_g36437 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.02 OrthoFinder output from all 47 species
Pnu_g32453 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005246 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.02 OrthoFinder output from all 47 species
Spa_g15594 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 198 269
IPR000504 RRM_dom 319 389
No external refs found!