Pp3c6_620V3.1 (Pp3c6_620)


Aliases : Pp3c6_620

Description : Nucleic acid-binding, OB-fold-like protein


Gene families : OG0000766 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000766_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_620V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00174410 evm_27.TU.AmTr_v1... Uncharacterized protein At4g28440 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g079686 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g112348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03855 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g30729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78465 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.20G003500.1 Ceric.20G003500 not classified & original description: pacid=50566972... 0.02 OrthoFinder output from all 47 species
Dac_g03914 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01020596001 No alias Uncharacterized protein At4g28440 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g26962 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10430582g0010 No alias Uncharacterized protein At4g28440 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10431244g0010 No alias Uncharacterized protein At4g28440 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_3311955g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g12246 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g45839 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g66109 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g10739 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g40428 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g13140 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g14128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!