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  5. Pp3c6_4380V3.1

Pp3c6_4380V3.1 (Pp3c6_4380)


Aliases : Pp3c6_4380

Description : Thiolase family protein


Gene families : OG0000360 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000360_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_4380V3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g012128 KAT2, PKT3, PED1 EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g12793 KAT2, PKT3, PED1 EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.02G094100.1 KAT2, PKT3,... EC_2.3 acyltransferase & original description:... 0.01 OrthoFinder output from all 47 species
Dde_g33420 KAT2, PKT3, PED1 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15535 KAT2, PKT3, PED1 3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Pnu_g17424 KAT2, PKT3, PED1 EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g19191 No alias EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g49655 No alias EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!