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  5. Pp3c6_4020V3.1

Pp3c6_4020V3.1 (Pp3c6_4020)


Aliases : Pp3c6_4020

Description : Translation initiation factor SUI1 family protein


Gene families : OG0000506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_4020V3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G54760 No alias Translation initiation factor SUI1 family protein 0.03 OrthoFinder output from all 47 species
AT5G54940 No alias Translation initiation factor SUI1 family protein 0.03 OrthoFinder output from all 47 species
Ala_g00314 No alias assembly factor (eIF1) of eIF1 & original description: none 0.04 OrthoFinder output from all 47 species
Gb_09385 No alias assembly factor (eIF1) of eIF1 0.02 OrthoFinder output from all 47 species
LOC_Os01g58220.1 LOC_Os01g58220 assembly factor (eIF1) of eIF1 0.03 OrthoFinder output from all 47 species
LOC_Os05g41900.1 LOC_Os05g41900 assembly factor (eIF1) of eIF1 0.03 OrthoFinder output from all 47 species
Ore_g12786 No alias assembly factor (eIF1) of eIF1 & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023202 No alias assembly factor (eIF1) of eIF1 & original description:... 0.01 OrthoFinder output from all 47 species
Spa_g03167 No alias assembly factor (eIF1) of eIF1 & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g37404 No alias assembly factor (eIF1) of eIF1 & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g24601 No alias assembly factor (eIF1) of eIF1 & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001950 SUI1 32 105
No external refs found!