1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c6_26730V3.1

Pp3c6_26730V3.1 (Pp3c6_26730)


Aliases : Pp3c6_26730

Description : transcription regulators


Gene families : OG0002046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_26730V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00133350 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.01 OrthoFinder output from all 47 species
Ehy_g17663 No alias scaffold component *(NOT1) of mRNA deadenylation... 0.01 OrthoFinder output from all 47 species
GSVIVT01018721001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.01 OrthoFinder output from all 47 species
LOC_Os10g40780.1 LOC_Os10g40780 component NOT1 of mRNA deadenylation CCR4-NOT complex 0.01 OrthoFinder output from all 47 species
Ore_g16116 No alias scaffold component *(NOT1) of mRNA deadenylation... 0.01 OrthoFinder output from all 47 species
Zm00001e000031_P001 Zm00001e000031 component NOT1 of mRNA deadenylation CCR4-NOT complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007196 CCR4-Not_Not1_C 1595 1930
IPR032193 CNOT1_TTP_bind 333 385
IPR024557 CNOT1_dom_4 968 1108
IPR032191 CNOT1_CAF1_bind 629 847
No external refs found!