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  5. Pp3c6_2640V3.1

Pp3c6_2640V3.1 (SPT42, Pp3c6_2640)


Aliases : SPT42, Pp3c6_2640

Description : SPT4 homolog 2


Gene families : OG0004229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_2640V3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g074024 SPT42 component *(SPT4) of SPT4/5 transcription elongation... 0.02 OrthoFinder output from all 47 species
Aev_g36396 No alias component *(SPT4) of SPT4/5 transcription elongation... 0.02 OrthoFinder output from all 47 species
Cba_g71083 No alias component *(SPT4) of SPT4/5 transcription elongation... 0.01 OrthoFinder output from all 47 species
Ceric.29G037600.1 Ceric.29G037600 component *(SPT4) of SPT4/5 transcription elongation... 0.03 OrthoFinder output from all 47 species
LOC_Os07g43060.1 SPT42, LOC_Os07g43060 component SPT4 of SPT4/5 transcription elongation factor complex 0.02 OrthoFinder output from all 47 species
MA_650g0010 SPT42 component SPT4 of SPT4/5 transcription elongation factor complex 0.02 OrthoFinder output from all 47 species
Solyc04g008750.3.1 SPT42, Solyc04g008750 component SPT4 of SPT4/5 transcription elongation factor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022800 Spt4/RpoE2_Znf 15 91
No external refs found!