LOC_Os05g40960 (Os05g0488600)


Aliases : Os05g0488600

Description : 27.3.20 RNA.regulation of transcription.G2-like transcription factor family, GARP Encodes MYR1 (MYR1). myb-related protein 1 (MYR1)


Gene families : OG_01_0000018 (Gene family) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os05g40960
Cluster HCCA cluster: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
AT1G14600 No alias Homeodomain-like superfamily protein 0.07 Gene family
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.05 Gene family
AT5G18240 ATMYR1, MYR1 myb-related protein 1 0.03 Gene family
GSVIVT01007064001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
GSVIVT01011163001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
GSVIVT01021225001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
GSVIVT01033381001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
GSVIVT01033515001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
GSVIVT01036717001 No alias No description available 0.03 Gene family
LOC_Os03g03760 Os03g0129800 27.3.20 RNA.regulation of transcription.G2-like... 0.04 Gene family
MA_21538g0020 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Smo149357 PACid_15410026 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Solyc04g008480.2.1 Solyc04g008480.2 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
Solyc04g015290.3.1 Solyc04g015290.3 27.3.20 RNA.regulation of transcription.G2-like... 0.04 Gene family
Solyc08g005260.2.1 Solyc08g005260.2 27.3.20 RNA.regulation of transcription.G2-like... 0.04 Gene family
Solyc09g005030.2.1 Solyc09g005030.2 27.3.20 RNA.regulation of transcription.G2-like... 0.04 Gene family
Solyc09g072830.3.1 Solyc09g072830.3 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
Solyc10g085620.2.1 Solyc10g085620.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d017563 GRMZM2G106185 27.3.20 RNA.regulation of transcription.G2-like... 0.07 Gene family
Zm00001d032249 GRMZM2G056400 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
Zm00001d032384 GRMZM2G113742 27.3.20 RNA.regulation of transcription.G2-like... 0.06 Gene family
Zm00001d038527 GRMZM2G701218 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 46 97
IPR025756 Myb_CC_LHEQLE 145 192
No external refs found!