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  5. Pp3c6_25370V3.1

Pp3c6_25370V3.1 (Pp3c6_25370)


Aliases : Pp3c6_25370

Description : tubulin-tyrosine ligases;tubulin-tyrosine ligases


Gene families : OG0002196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_25370V3.1

Target Alias Description ECC score Gene Family Method Actions
Ceric.04G010200.1 Ceric.04G010200 not classified & original description: pacid=50631016... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000551.10 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020564.19 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020685.29 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre01.g050451 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre02.g146650 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre09.g403108 No alias No description available 0.01 OrthoFinder output from all 47 species
Mp8g02150.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Sam_g17309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004344 TTL/TTLL_fam 100 394
No external refs found!