LOC_Os05g40740 (Os05g0485800)


Aliases : Os05g0485800

Description : 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11)


Gene families : OG_01_0000406 (Gene family) Phylogenetic Tree(s): OG0000406_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os05g40740
Cluster HCCA cluster: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT1G21850 sks8 SKU5 similar 8 0.03 Gene family
AT1G55560 sks14 SKU5 similar 14 0.05 Gene family
AT1G55570 sks12 SKU5 similar 12 0.06 Gene family
AT1G76160 sks5 SKU5 similar 5 0.04 Gene family
AT3G13390 sks11 SKU5 similar 11 0.09 Gene family
AT3G13400 sks13 SKU5 similar 13 0.13 Gene family
AT4G37160 sks15 SKU5 similar 15 0.03 Gene family
GSVIVT01023902001 No alias 35.1 not assigned.no ontology SKU5 similar 5 (sks5) 0.02 Gene family
LOC_Os07g02810 Os07g0119400 26.7 misc.oxidases - copper, flavone etc SKU5 similar 17 (sks17) 0.03 Gene family
MA_10254g0020 No alias 26.7 misc.oxidases - copper, flavone etc SKU5 similar 4 (sks4) 0.04 Gene family
Solyc01g005510.3.1 Solyc01g005510.3 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.12 Gene family
Solyc01g056310.3.1 Solyc01g056310.3 26.7 misc.oxidases - copper, flavone etc SKU5 similar 12 (sks12) 0.11 Gene family
Solyc02g090360.3.1 Solyc02g090360.3 26.7 misc.oxidases - copper, flavone etc SKU5 similar 17 (sks17) 0.02 Gene family
Solyc03g063150.3.1 Solyc03g063150.3 26.7 misc.oxidases - copper, flavone etc SKU5 similar 12 (sks12) 0.08 Gene family
Solyc05g055710.3.1 Solyc05g055710.3 26.7 misc.oxidases - copper, flavone etc SKU5 similar 12 (sks12) 0.05 Gene family
Solyc12g094460.2.1 Solyc12g094460.2 35.1 not assigned.no ontology SKU5 similar 5 (sks5) 0.02 Gene family
Zm00001d012524 GRMZM2G068682 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.14 Gene family
Zm00001d018696 GRMZM2G043301 26.7 misc.oxidases - copper, flavone etc SKU5 similar 17 (sks17) 0.02 Gene family
Zm00001d038521 GRMZM2G129064 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.2 Gene family
Zm00001d043090 GRMZM2G157929 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.16 Gene family

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan
MF GO:0016491 oxidoreductase activity IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001117 Cu-oxidase 164 304
IPR011707 Cu-oxidase_3 38 150
IPR011706 Cu-oxidase_2 385 523
No external refs found!