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  5. Pp3c6_17230V3.1

Pp3c6_17230V3.1 (TIF3H1, Pp3c6_17230)


Aliases : TIF3H1, Pp3c6_17230

Description : translation initiation factor 3 subunit H1


Gene families : OG0004382 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_17230V3.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT1G10840 TIF3H1 translation initiation factor 3 subunit H1 0.03 OrthoFinder output from all 47 species
Aop_g02099 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.01 OrthoFinder output from all 47 species
Ceric.21G002900.1 TIF3H1, Ceric.21G002900 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g09962 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01031659001 TIF3H1 Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
LOC_Os04g30780.1 TIF3H1, LOC_Os04g30780 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
MA_32338g0010 TIF3H1 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Mp3g20490.1 TIF3H1 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.01 OrthoFinder output from all 47 species
Sam_g11391 No alias component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Smo153526 TIF3H1 Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Zm00001e040713_P002 TIF3H1, Zm00001e040713 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 26 131
No external refs found!