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  5. Pp3c6_15820V3.1

Pp3c6_15820V3.1 (Pp3c6_15820)


Aliases : Pp3c6_15820

Description : No annotation


Gene families : OG0008980 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008980_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_15820V3.1

Target Alias Description ECC score Gene Family Method Actions
Pp3c3_22840V3.1 Pp3c3_22840 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c5_3950V3.1 Pp3c5_3950 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c7_22780V3.1 Pp3c7_22780 No annotation 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006313 transposition, DNA-mediated IEA Interproscan
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002492 Transposase_Tc1-like 72 133
IPR038717 Tc1-like_DDE_dom 144 295
No external refs found!