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  5. Pp3c6_15300V3.1

Pp3c6_15300V3.1 (NRS/ER, UER1, Pp3c6_15300)


Aliases : NRS/ER, UER1, Pp3c6_15300

Description : nucleotide-rhamnose synthase/epimerase-reductase


Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_15300V3.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT3G14790 ATRHM3, RHM3 rhamnose biosynthesis 3 0.02 OrthoFinder output from all 47 species
Als_g05083 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G025600.1 RHM1, ROL1,... UDP-L-rhamnose synthase *(RHM) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.06G075500.1 RHM1, ROL1,... UDP-L-rhamnose synthase *(RHM) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.13G016100.1 NRS/ER, UER1,... dTDP-rhamnose synthase *(NRS-ER) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.33G035200.1 NRS/ER, UER1,... dTDP-rhamnose synthase *(NRS-ER) & original description:... 0.01 OrthoFinder output from all 47 species
Cre09.g387171 NRS/ER, UER1 Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
Gb_35655 NRS/ER, UER1 UDP-L-rhamnose synthase 0.02 OrthoFinder output from all 47 species
Lfl_g04170 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g04880.1 NRS/ER, UER1 UDP-L-rhamnose synthase 0.02 OrthoFinder output from all 47 species
Mp6g02720.1 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase 0.02 OrthoFinder output from all 47 species
Nbi_g05698 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g56481 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g13458 No alias UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g080140.4.1 NRS/ER, UER1,... UDP-L-rhamnose synthase 0.02 OrthoFinder output from all 47 species
Solyc10g007480.4.1 RHM1, ROL1,... UDP-L-rhamnose synthase 0.01 OrthoFinder output from all 47 species
Spa_g01511 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR029903 RmlD-like-bd 14 187
No external refs found!