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  5. Pp3c6_11410V3.1

Pp3c6_11410V3.1 (LACS4, Pp3c6_11410)


Aliases : LACS4, Pp3c6_11410

Description : AMP-dependent synthetase and ligase family protein


Gene families : OG0000612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_11410V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00113600 CER8, LACS1,... Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AMTR_s00003p00117760 CER8, LACS1,... Enzyme classification.EC_6 ligases.EC_6.2 ligase forming... 0.02 OrthoFinder output from all 47 species
AT1G49430 LRD2, LACS2 long-chain acyl-CoA synthetase 2 0.02 OrthoFinder output from all 47 species
AT2G47240 CER8, LACS1 AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
Aob_g07369 LACS6, ATLACS6 EC_6.2 ligase forming carbon-sulfur bond & original... 0.01 OrthoFinder output from all 47 species
Aop_g06527 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.01 OrthoFinder output from all 47 species
Ceric.24G023000.1 LACS4, Ceric.24G023000 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Cre12.g507400 LACS6, ATLACS6 Lipid metabolism.lipid degradation.fatty acid... 0.01 OrthoFinder output from all 47 species
Cre13.g566650 No alias Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g13723 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Dcu_g08877 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08481 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.01 OrthoFinder output from all 47 species
Gb_09959 LACS4 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_32132 LACS4 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g04170.1 CER8, LACS1,... Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_10432761g0010 LACS4 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_839621g0010 No alias Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pnu_g15322 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.01 OrthoFinder output from all 47 species
Ppi_g17117 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Sam_g15770 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.01 OrthoFinder output from all 47 species
Solyc01g079240.3.1 CER8, LACS1,... Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc01g095750.2.1 LACS4, Solyc01g095750 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc01g109180.4.1 LRD2, LACS2,... Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc09g075770.3.1 LACS6, ATLACS6,... peroxisomal long-chain acyl-CoA synthetase 0.01 OrthoFinder output from all 47 species
Spa_g26451 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Spa_g47685 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.01 OrthoFinder output from all 47 species
Zm00001e036457_P004 LACS4, Zm00001e036457 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 145 463
No external refs found!