LOC_Os05g39930 (Os05g0476700)


Aliases : Os05g0476700

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM repeat superfamily protein


Gene families : OG_01_0000803 (Gene family) Phylogenetic Tree(s): OG0000803_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os05g39930
Cluster HCCA cluster: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030205001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM... 0.02 Gene family
Solyc02g072080.1.1 Solyc02g072080.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
Zm00001d012494 GRMZM2G019777 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM... 0.04 Gene family
Zm00001d038471 GRMZM2G125034 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM... 0.18 Gene family
Zm00001d043043 GRMZM2G027375 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000225 Armadillo 408 446
IPR003613 Ubox_domain 276 345
No external refs found!