LOC_Os05g39930 (Os05g0476700)

Aliases : Os05g0476700

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM repeat superfamily protein

Gene families : OG_01_0000803 (Gene family) Phylogenetic Tree(s): OG0000803_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): LOC_Os05g39930
Cluster	HCCA cluster: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01030205001	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM...	0.02	Gene family
Solyc02g072080.1.1	Solyc02g072080.1	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.07	Gene family
Zm00001d012494	GRMZM2G019777	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM...	0.04	Gene family
Zm00001d038471	GRMZM2G125034	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM...	0.18	Gene family
Zm00001d043043	GRMZM2G027375	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM...	0.05	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	408	446
IPR003613	Ubox_domain	276	345

External Links

No external refs found!