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  5. Pp3c5_600V3.1

Pp3c5_600V3.1 (Pp3c5_600)


Aliases : Pp3c5_600

Description : Histone superfamily protein


Gene families : OG0000254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_600V3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00186150 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Aev_g28066 No alias histone *(H4) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g30988 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G002400.1 Ceric.05G002400 histone *(H4) & original description: pacid=50578984... 0.01 OrthoFinder output from all 47 species
Ceric.12G062500.1 Ceric.12G062500 histone *(H4) & original description: pacid=50600733... 0.01 OrthoFinder output from all 47 species
Ceric.12G081100.1 Ceric.12G081100 histone *(H4) & original description: pacid=50601273... 0.01 OrthoFinder output from all 47 species
Dde_g47245 No alias histone *(H4) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g21947 No alias histone *(H4) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g27670 No alias histone *(H4) & original description: none 0.01 OrthoFinder output from all 47 species
MA_38882g0010 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
MA_83574g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Msp_g09243 No alias histone *(H4) & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012615 No alias histone *(H4) & original description: CDS=1-477 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!