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  5. Pp3c5_2700V3.1

Pp3c5_2700V3.1 (RPL12-C, Pp3c5_2700)


Aliases : RPL12-C, Pp3c5_2700

Description : ribosomal protein L12-C


Gene families : OG0004015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_2700V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00109340 RPL12-A, RPL12,... Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
AT3G27830 RPL12-A, RPL12 ribosomal protein L12-A 0.07 OrthoFinder output from all 47 species
AT3G27850 RPL12-C ribosomal protein L12-C 0.1 OrthoFinder output from all 47 species
Adi_g079765 RPL12-C component *(bL12c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aev_g46439 RPL12-C component *(bL12c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Ala_g28151 RPL12-A, RPL12 component *(bL12c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Als_g10576 RPL12-C component *(bL12c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Als_g18386 RPL12-C component *(bL12c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Als_g26767 RPL12-A, RPL12 component *(bL12c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g05079 RPL12-A, RPL12 component *(bL12c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007798 RPL12-C component *(bL12c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.11G086700.1 RPL12-C, Ceric.11G086700 component *(bL12c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.23G047100.1 RPL12-A, RPL12,... component *(bL12c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Cre13.g581650 No alias Protein biosynthesis.organelle translation... 0.08 OrthoFinder output from all 47 species
Dac_g04548 RPL12-A, RPL12 component *(bL12c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dcu_g15795 RPL12-A, RPL12 component *(bL12c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dde_g20806 RPL12-A, RPL12 component *(bL12c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01032454001 RPL12-A, RPL12 Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Gb_05150 RPL12-C component psRPL12 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
LOC_Os01g47330.1 RPL12-C, LOC_Os01g47330 component psRPL12 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
LOC_Os05g49320.1 RPL12-C, LOC_Os05g49320 component psRPL12 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Len_g10218 RPL12-C component *(bL12c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Mp5g15720.1 RPL12-C component psRPL12 of large ribosomal subunit proteome 0.1 OrthoFinder output from all 47 species
Msp_g09960 RPL12-A, RPL12 component *(bL12c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Msp_g10664 RPL12-C component *(bL12c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Nbi_g08072 RPL12-A, RPL12 component *(bL12c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ore_g01687 RPL12-C component *(bL12c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Ore_g06697 RPL12-A, RPL12 component *(bL12c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pir_g06429 RPL12-A, RPL12 component *(bL12c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019415 RPL12-C component *(bL12c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sam_g51250 No alias component *(bL12c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Solyc02g086730.3.1 RPL12-C, Solyc02g086730 component psRPL12 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Solyc02g086740.1.1 RPL12-C, Solyc02g086740 component psRPL12 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Spa_g08718 RPL12-C component *(bL12c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Spa_g56005 RPL12-C component *(bL12c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Tin_g00273 RPL12-A, RPL12 component *(bL12c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e020247_P001 RPL12-C, Zm00001e020247 component psRPL12 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Zm00001e028001_P001 RPL12-C, Zm00001e028001 component psRPL12 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008932 Ribosomal_L7/L12_oligo 65 109
IPR013823 Ribosomal_L7/L12_C 123 190
No external refs found!