Pp3c5_23010V3.1 (HSP93-V, DCA1,...)

Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1, Pp3c5_23010

Description : CLPC homologue 1

Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c5_23010V3.1
Cluster	HCCA: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
Ala_g12182	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.18G061200.1	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Ore_g29985	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Spa_g10084	HSP93-V, DCA1,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g46302	CLPB3, CLPB-P, APG6	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e008312_P001	HSP93-V, DCA1,...	chaperone component ClpC of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species
Zm00001e040778_P001	HSP93-V, DCA1,...	chaperone component ClpC of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004176	Clp_R_dom	116	168
IPR004176	Clp_R_dom	192	243
IPR003959	ATPase_AAA_core	644	819
IPR003959	ATPase_AAA_core	307	436
IPR041546	ClpA/ClpB_AAA_lid	445	547
IPR019489	Clp_ATPase_C	825	903

External Links

No external refs found!