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  5. Pp3c5_13940V3.1

Pp3c5_13940V3.1 (Pp3c5_13940)


Aliases : Pp3c5_13940

Description : ARM repeat superfamily protein


Gene families : OG0001077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_13940V3.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Mp8g11800.1 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase (PUB) 0.01 OrthoFinder output from all 47 species
Msp_g13315 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g35802 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g10869 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!