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  5. Pp3c4_9720V3.1

Pp3c4_9720V3.1 (SDG33, SUVH4, KYP, Pp3c4_9720)


Aliases : SDG33, SUVH4, KYP, Pp3c4_9720

Description : SU(VAR)3-9 homolog 4


Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_9720V3.1

Target Alias Description ECC score Gene Family Method Actions
Cba_g38983 SET22, SDG22, SUVH9 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
Ceric.02G055100.1 SUVH1, Ceric.02G055100 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
Dde_g10200 SDG23, SUVH6 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
GSVIVT01032986001 SDG33, SUVH4, KYP Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
LOC_Os07g25450.1 ATSUVH2, SDG3,... class V/Su(var) histone methyltransferase component of... 0.01 OrthoFinder output from all 47 species
LOC_Os11g38900.1 SUVH3, SDG19,... class V/Su(var) histone methyltransferase component of... 0.01 OrthoFinder output from all 47 species
Lfl_g02390 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
MA_790260g0010 SUVH5, SGD9 class V/Su(var) histone methyltransferase component of... 0.01 OrthoFinder output from all 47 species
Nbi_g01190 SDG33, SUVH4, KYP EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
Solyc02g094520.3.1 SDG33, SUVH4,... class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
Solyc03g093700.3.1 SDG23, SUVH6,... class V/Su(var) histone methyltransferase component of... 0.01 OrthoFinder output from all 47 species
Zm00001e003855_P002 SET22, SDG22,... class V/Su(var) histone methyltransferase component of... 0.01 OrthoFinder output from all 47 species
Zm00001e033937_P001 Zm00001e033937 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
CC GO:0042555 MCM complex IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051095 regulation of helicase activity IEP HCCA
BP GO:0051097 negative regulation of helicase activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:1905462 regulation of DNA duplex unwinding IEP HCCA
BP GO:1905463 negative regulation of DNA duplex unwinding IEP HCCA
BP GO:1905774 regulation of DNA helicase activity IEP HCCA
BP GO:1905775 negative regulation of DNA helicase activity IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 593 728
IPR003105 SRA_YDG 278 443
IPR007728 Pre-SET_dom 473 574
No external refs found!