LOC_Os05g38120 (Os05g0455200)

Aliases : Os05g0455200

Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP. REPLUMLESS (RPL)

Gene families : OG_01_0000167 (Gene family) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os05g38120
Cluster HCCA cluster: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT1G75430 BLH11 BEL1-like homeodomain 11 0.02 Gene family
AT2G27990 BLH8, PNF BEL1-like homeodomain 8 0.03 Gene family
AT5G02030 VAN, BLH9, RPL,... POX (plant homeobox) family protein 0.04 Gene family
AT5G41410 BEL1 POX (plant homeobox) family protein 0.03 Gene family
GSVIVT01009781001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d010060 GRMZM2G074645 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d027802 GRMZM2G004641 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 356 395
IPR006563 POX_dom 158 290
No external refs found!