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  5. Pp3c4_3530V3.1

Pp3c4_3530V3.1 (SNF7.2, VPS32, Pp3c4_3530)


Aliases : SNF7.2, VPS32, Pp3c4_3530

Description : SNF7 family protein


Gene families : OG0001125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_3530V3.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035334001 SNF7.1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 OrthoFinder output from all 47 species
Ppi_g15272 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007126 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.01 OrthoFinder output from all 47 species
Spa_g05676 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 20 185
No external refs found!