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  5. AMTR_s00059p00214550

AMTR_s00059p00214550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.254

Description : Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP58 nucleoporin


Gene families : OG_01_0004923 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004923_tree ,
OG_02_0006361 (LandPlants) Phylogenetic Tree(s): OG_02_0006361_tree ,
OG_03_0006201 (SeedPlants) Phylogenetic Tree(s): OG_03_0006201_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00214550
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT4G37130 No alias hydroxyproline-rich glycoprotein family protein 0.03 Archaeplastida
Cre16.g685217 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
GSVIVT01005079001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.07 Archaeplastida
Gb_35852 No alias NUP58 nucleoporin of nuclear pore complex 0.04 Archaeplastida
LOC_Os09g28019.1 No alias NUP58 nucleoporin of nuclear pore complex 0.02 Archaeplastida
Mp5g05860.1 No alias NUP58 nucleoporin of nuclear pore complex 0.02 Archaeplastida
Solyc02g090230.4.1 No alias NUP58 nucleoporin of nuclear pore complex 0.04 Archaeplastida
Zm00001e009921_P001 No alias NUP58 nucleoporin of nuclear pore complex 0.02 Archaeplastida
AT4G37130 No alias hydroxyproline-rich glycoprotein family protein 0.03 LandPlants
GSVIVT01005079001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 LandPlants
Gb_35852 No alias NUP58 nucleoporin of nuclear pore complex 0.04 LandPlants
LOC_Os09g28019.1 No alias NUP58 nucleoporin of nuclear pore complex 0.02 LandPlants
Mp5g05860.1 No alias NUP58 nucleoporin of nuclear pore complex 0.02 LandPlants
Solyc02g090230.4.1 No alias NUP58 nucleoporin of nuclear pore complex 0.04 LandPlants
Zm00001e009921_P001 No alias NUP58 nucleoporin of nuclear pore complex 0.02 LandPlants
AT4G37130 No alias hydroxyproline-rich glycoprotein family protein 0.03 SeedPlants
GSVIVT01005079001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 SeedPlants
Gb_35852 No alias NUP58 nucleoporin of nuclear pore complex 0.03 SeedPlants
LOC_Os09g28019.1 No alias NUP58 nucleoporin of nuclear pore complex 0.02 SeedPlants
Solyc02g090230.4.1 No alias NUP58 nucleoporin of nuclear pore complex 0.04 SeedPlants
Zm00001e009921_P001 No alias NUP58 nucleoporin of nuclear pore complex 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!