Pp3c4_20930V3.1 (Pp3c4_20930)

Aliases : Pp3c4_20930

Description : signal recognition particle binding

Gene families : OG0005104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005104_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c4_20930V3.1
Cluster	HCCA: Cluster_39

Target	Alias	Description	ECC score	Gene Family Method
Dac_g10072	No alias	component *(SR-beta) of SRP (signal recognition...	0.01	OrthoFinder output from all 47 species
Ore_g05211	No alias	component *(SR-beta) of SRP (signal recognition...	0.02	OrthoFinder output from all 47 species
Solyc11g043150.2.1	Solyc11g043150	component SR-beta of SRP (signal recognition particle)...	0.02	OrthoFinder output from all 47 species
Zm00001e022341_P001	Zm00001e022341	component SR-beta of SRP (signal recognition particle)...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0005048	signal sequence binding	IEP	HCCA
BP	GO:0006621	protein retention in ER lumen	IEP	HCCA
BP	GO:0032507	maintenance of protein location in cell	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
BP	GO:0045185	maintenance of protein location	IEP	HCCA
MF	GO:0046923	ER retention sequence binding	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051235	maintenance of location	IEP	HCCA
BP	GO:0051651	maintenance of location in cell	IEP	HCCA
BP	GO:0072595	maintenance of protein localization in organelle	IEP	HCCA
MF	GO:0098599	palmitoyl hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019009	SRP_receptor_beta_su	68	247

External Links

No external refs found!