1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c4_17440V3.1

Pp3c4_17440V3.1 (Pp3c4_17440)


Aliases : Pp3c4_17440

Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_17440V3.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Adi_g064547 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene21770.t1 Aspi01Gene21770 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g09256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G061100.1 Ceric.19G061100 not classified & original description: pacid=50575703... 0.01 OrthoFinder output from all 47 species
Dcu_g04585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03669 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc03g121710.2.1 Solyc03g121710 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Zm00001e032753_P002 Zm00001e032753 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 88 155
IPR000504 RRM_dom 177 245
No external refs found!