Pp3c3_23250V3.1 (Pp3c3_23250)

Aliases : Pp3c3_23250

Description : pescadillo-related

Gene families : OG0005537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005537_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c3_23250V3.1
Cluster	HCCA: Cluster_120

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00072p00157670	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AT5G14520	No alias	pescadillo-related	0.04	OrthoFinder output from all 47 species
Aob_g06678	No alias	component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW)...	0.01	OrthoFinder output from all 47 species
Aop_g17990	No alias	component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW)...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020961.62	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Cre16.g683793	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
GSVIVT01032412001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Gb_12407	No alias	component PES of ribosome PES-BOP1-WDR12 (PeBoW) complex	0.02	OrthoFinder output from all 47 species
Pir_g09592	No alias	component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW)...	0.01	OrthoFinder output from all 47 species
Solyc07g047670.3.1	Solyc07g047670	component PES of ribosome PES-BOP1-WDR12 (PeBoW) complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0042254	ribosome biogenesis	IEA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010613	PES	19	272
IPR001357	BRCT_dom	349	435

External Links

No external refs found!