- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Pp3c3_20060
Description : No annotation
Gene families : OG0000992 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000992_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c3_20060V3.1 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aspi01Gene37121.t1 | Aspi01Gene37121 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene42994.t1 | Aspi01Gene42994 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene54891.t1 | SYP125,... | Qa-type SYP1-group component of SNARE membrane fusion... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene59462.t1 | Aspi01Gene59462 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene63366.t1 | Aspi01Gene63366 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os01g07990.1 | LOC_Os01g07990 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g49224 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g00075 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g11983 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g09969 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c10_2400V3.1 | Pp3c10_2400 | No annotation | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c13_15770V3.1 | Pp3c13_15770 | PIF1 helicase | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c14_26730V3.1 | Pp3c14_26730 | No annotation | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c15_9490V3.1 | Pp3c15_9490 | PIF1 helicase | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c15_9500V3.1 | Pp3c15_9500 | No annotation | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c17_17890V3.1 | Pp3c17_17890 | No annotation | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c17_18610V3.1 | Pp3c17_18610 | PIF1 helicase | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c18_20670V3.1 | Pp3c18_20670 | No annotation | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c22_19090V3.1 | Pp3c22_19090 | No annotation | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c23_11220V3.1 | Pp3c23_11220 | No annotation | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c23_8030V3.1 | Pp3c23_8030 | PIF1 helicase | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c7_6800V3.1 | Pp3c7_6800 | No annotation | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g16137 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g46053 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006098 | pentose-phosphate shunt | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006739 | NADP metabolic process | IEP | HCCA |
| BP | GO:0006740 | NADPH regeneration | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | HCCA |
| BP | GO:0051156 | glucose 6-phosphate metabolic process | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |