Pp3c3_1280V3.1 (Pp3c3_1280)

Aliases : Pp3c3_1280

Description : NB-ARC domain-containing disease resistance protein

Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c3_1280V3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00062p00089750	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g27220...	0.01	OrthoFinder output from all 47 species
AMTR_s00062p00106420	evm_27.TU.AmTr_v1...	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Gb_08717	RPS5	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Gb_12859	No alias	Probable disease resistance protein At4g27220...	0.01	OrthoFinder output from all 47 species
LOC_Os03g14900.1	LOC_Os03g14900	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
MA_40435g0010	No alias	Probable disease resistance protein At1g61310...	0.01	OrthoFinder output from all 47 species
MA_5270774g0010	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Pp3c19_2480V3.1	Pp3c19_2480	NB-ARC domain-containing disease resistance protein	0.02	OrthoFinder output from all 47 species
Pp3c3_6800V3.1	Pp3c3_6800	Disease resistance protein (CC-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
Spa_g26757	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	222	431
IPR001611	Leu-rich_rpt	607	663

External Links

No external refs found!