Pp3c2_9144V3.1 (UBP1B, Pp3c2_9144)

Aliases : UBP1B, Pp3c2_9144

Description : oligouridylate binding protein 1B

Gene families : OG0002014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002014_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c2_9144V3.1
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00269220	evm_27.TU.AmTr_v1...	Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia	0.01	OrthoFinder output from all 47 species
Ala_g07833	UBP1B	stress granule assembly factor *(UBP1) & original...	0.02	OrthoFinder output from all 47 species
Lfl_g24390	UBP1B	stress granule assembly factor *(UBP1) & original...	0.02	OrthoFinder output from all 47 species
Sam_g25420	No alias	stress granule assembly factor *(UBP1) & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	110	180
IPR000504	RRM_dom	21	80
IPR000504	RRM_dom	246	311

External Links

No external refs found!