Mp7g11380.1


Description : PAP2/TAC2 cofactor of plastid-encoded RNA polymerase


Gene families : OG_01_0008584 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008584_tree ,
OG_02_0007907 (LandPlants) Phylogenetic Tree(s): OG_02_0007907_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g11380.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT1G74850 PTAC2 plastid transcriptionally active 2 0.14 Archaeplastida
GSVIVT01007844001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.05 Archaeplastida
LOC_Os03g60910.1 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.05 Archaeplastida
MA_140582g0010 No alias Pentatricopeptide repeat-containing protein At1g74850,... 0.06 Archaeplastida
Pp3c11_11830V3.1 No alias plastid transcriptionally active 2 0.1 Archaeplastida
Solyc03g113630.3.1 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.04 Archaeplastida
Zm00001e035964_P003 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.08 Archaeplastida
AT1G74850 PTAC2 plastid transcriptionally active 2 0.14 LandPlants
GSVIVT01007844001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.05 LandPlants
LOC_Os03g60910.1 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.05 LandPlants
MA_140582g0010 No alias Pentatricopeptide repeat-containing protein At1g74850,... 0.05 LandPlants
Pp3c11_11830V3.1 No alias plastid transcriptionally active 2 0.07 LandPlants
Solyc03g113630.3.1 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.04 LandPlants
Zm00001e035964_P003 No alias PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.08 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 691 718
IPR002885 Pentatricopeptide_repeat 255 314
IPR002885 Pentatricopeptide_repeat 396 456
IPR002885 Pentatricopeptide_repeat 194 245
IPR002885 Pentatricopeptide_repeat 477 524
IPR002885 Pentatricopeptide_repeat 618 662
IPR002885 Pentatricopeptide_repeat 554 594
IPR002885 Pentatricopeptide_repeat 337 384
No external refs found!