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  5. Pp3c2_410V3.1

Pp3c2_410V3.1 (ATZIP4, Pp3c2_410)


Aliases : ATZIP4, Pp3c2_410

Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0004175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004175_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_410V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00211490 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01001528001 ATZIP4 Cell cycle.mitosis and meiosis.meiotic... 0.02 OrthoFinder output from all 47 species
MA_99496g0010 ATZIP4 meiotic crossover accessory protein (SPO22/ZIP4) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0051321 meiotic cell cycle IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
InterPro domains Description Start Stop
IPR013940 Spo22/ZIP4/TEX11 139 422
IPR013940 Spo22/ZIP4/TEX11 430 624
No external refs found!