LOC_Os05g33150 (Os05g0399700)


Aliases : Os05g0399700

Description : 20.1 stress.biotic encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. basic chitinase (HCHIB)


Gene families : OG_01_0000294 (Gene family) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os05g33150
Cluster HCCA cluster: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AT3G54420 ATEP3, EP3,... homolog of carrot EP3-3 chitinase 0.03 Gene family
GSVIVT01038111001 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.04 Gene family
GSVIVT01038120001 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family
LOC_Os04g41680 Os04g0494100 20.1 stress.biotic encodes an EP3 chitinase that is... 0.02 Gene family
LOC_Os10g39700 Os10g0543400 20.1 stress.biotic encodes a basic chitinase involved in... 0.02 Gene family
MA_102538g0010 No alias 20.1 stress.biotic Chitinase family protein 0.02 Gene family
MA_10427514g0010 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.02 Gene family
MA_10431378g0010 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.02 Gene family
MA_10431378g0020 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.02 Gene family
MA_10435326g0010 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.01 Gene family
MA_170598g0010 No alias 20.1 stress.biotic Chitinase family protein 0.02 Gene family
MA_448160g0010 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.02 Gene family
Smo14768 PACid_15413752 No description available 0.02 Gene family
Zm00001d003190 GRMZM2G051943 20.1 stress.biotic Chitinase family protein 0.02 Gene family
Zm00001d017152 GRMZM2G129189 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family
Zm00001d025753 GRMZM2G005633 20.1 stress.biotic encodes an EP3 chitinase that is... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan
BP GO:0006032 chitin catabolic process IEA InterProScan
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 34 71
IPR000726 Glyco_hydro_19_cat 100 323
No external refs found!