LOC_Os05g33130 (Os05g0399300)


Aliases : Os05g0399300

Description : 20.1 stress.biotic encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. basic chitinase (HCHIB)


Gene families : OG_01_0001170 (Gene family) Phylogenetic Tree(s): OG0001170_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os05g33130
Cluster HCCA cluster: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007190001 No alias 20.1 stress.biotic encodes a basic chitinase involved in... 0.04 Gene family
LOC_Os03g04060 Os03g0132900 20.1 stress.biotic encodes a basic chitinase involved in... 0.02 Gene family
LOC_Os06g51060 Os06g0726200 20.1 stress.biotic encodes a basic chitinase involved in... 0.03 Gene family
LOC_Os10g39680 Os10g0542900 20.1 stress.biotic encodes a basic chitinase involved in... 0.04 Gene family
MA_10313114g0010 No alias 20.1 stress.biotic encodes a basic chitinase involved in... 0.02 Gene family
Smo446851 PACid_15403160 No description available 0.02 Gene family
Solyc02g061770.3.1 Solyc02g061770.3 20.1 stress.biotic encodes a basic chitinase involved in... 0.01 Gene family
Solyc02g082920.3.1 Solyc02g082920.3 20.1 stress.biotic encodes a basic chitinase involved in... 0.04 Gene family
Solyc02g082930.3.1 Solyc02g082930.3 20.1 stress.biotic encodes a basic chitinase involved in... 0.03 Gene family
Solyc10g074440.2.1 Solyc10g074440.2 20.1 stress.biotic encodes a basic chitinase involved in... 0.02 Gene family
Zm00001d027524 GRMZM2G099454 20.1 stress.biotic encodes a basic chitinase involved in... 0.02 Gene family
Zm00001d027525 No alias 20.1 stress.biotic encodes a basic chitinase involved in... 0.03 Gene family
Zm00001d029794 GRMZM2G103668 20.1 stress.biotic encodes a basic chitinase involved in... 0.05 Gene family
Zm00001d036370 GRMZM2G145461 20.1 stress.biotic encodes a basic chitinase involved in... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 92 323
IPR001002 Chitin-bd_1 34 71
No external refs found!